Search found 72 matches

by jjmiller
Thu May 23, 2024 9:30 am
Forum: Announcements - Folding Consortium
Topic: Project 18224 on FAH (OpenMM, Core 23)
Replies: 0
Views: 40

Project 18224 on FAH (OpenMM, Core 23)

[GPU] p18224 – Simulations of phosphoglycerate kinase- https://stats.foldingathome.org/project?p=18224 <project type="OPENMM_23" id="18224"> <stats-credit v="206790"/> <deadline v="5"/> GPU Species: AMD species > 4 Nvidia species > 7
by jjmiller
Wed May 22, 2024 2:06 pm
Forum: Issues with a specific server
Topic: Impossibly slow servers
Replies: 3
Views: 202

Re: Impossibly slow servers

Hi enroscado,

Are you seeing this just with the highlandX servers or more broadly across all servers? Happy to bring this up to the folks who manage our (UPenn's) networks if it's exclusively happening with our servers.

Thanks!
by jjmiller
Fri Apr 26, 2024 2:05 pm
Forum: Announcements - Folding Consortium
Topic: Projects 1822[2,3] on full FAH
Replies: 0
Views: 784

Projects 1822[2,3] on full FAH

[GPU] p18222 – Studies on Apolipoprotein E2(Serine), a variant of ApoE2 used in some wet lab experiments to facilitate chemical modification of the protein. These simulations will inform us the validity of the experimental mutation and inform any potential differences between experiment and simulati...
by jjmiller
Thu Apr 04, 2024 10:56 am
Forum: Announcements - Folding Consortium
Topic: P18221 OpenMMx23 on full FAH!
Replies: 0
Views: 964

P18221 OpenMMx23 on full FAH!

[GPU] p18221 – Studies on Apolipoprotein E3(Serine), a variant of ApoE3 used in some wet lab experiments to facilitate chemical modification of the protein. These simulations will inform us the validity of the experimental mutation and inform any potential differences between experiment and simulati...
by jjmiller
Sat Mar 02, 2024 12:31 am
Forum: Issues with a specific server
Topic: 158.130.118.24 slow download
Replies: 5
Views: 2720

Re: 158.130.118.24 slow download

Thanks- I've been looking into this with our network staff and we're coming up empty so far. Have you also been seeing slow downloads for projects 18218 or 18220? These are highly similar in terms of what is being sent, but housed on different servers (158.130.118.25/26 respectively) so might help u...
by jjmiller
Thu Feb 22, 2024 3:21 pm
Forum: Issues with a specific server
Topic: 158.130.118.24 slow download
Replies: 5
Views: 2720

Re: 158.130.118.24 slow download

Hello! Sorry for the slow reply- are you still seeing slow downloads from this server?
by jjmiller
Sun Feb 04, 2024 3:19 pm
Forum: Announcements - Folding Consortium
Topic: p18220 [0x23, GPU] on full FAH!
Replies: 0
Views: 2937

p18220 [0x23, GPU] on full FAH!

[GPU] p18220 – Studies on Apolipoprotein E2, a semi-common, protective variant of ApoE - https://stats.foldingathome.org/project?p=18220

Code: Select all

<project type="OPENMM_23" id="18220">
<stats-credit v="67168"/>
<deadline v="5"/>
by jjmiller
Sun Feb 04, 2024 3:17 pm
Forum: Issues with a specific server
Topic: Failed to send results to work server - 158.130.86.56
Replies: 7
Views: 1782

Re: Failed to send results to work server - 158.130.86.56

Wanted to check in - are you still seeing this issue? Usually 158.... servers are the Penn servers, but we don't have any at that IP address. Echoing BobWilliams757's request- if you send along the full log that has the IP address included we may be able to sort things out a bit more!
by jjmiller
Sun Jan 28, 2024 2:48 pm
Forum: Announcements - Folding Consortium
Topic: p18219 [GPU, 0x23] on FAH!
Replies: 0
Views: 2597

p18219 [GPU, 0x23] on FAH!

[GPU] p18219 – Studies on Apolipoprotein E. We're running more simulations of Apolipoprotein E3, a common isoform of ApoE, in hopes of understanding its conformational dynamics. We will use these simulations as a "baseline" for understanding how other isoforms associated with Alzheimer's d...
by jjmiller
Sat Jan 27, 2024 10:04 am
Forum: Announcements - Folding Consortium
Topic: Project 18218 [GPU, OpenMM 23] on FAH
Replies: 0
Views: 2412

Project 18218 [GPU, OpenMM 23] on FAH

[GPU] p18218 – Studies on Apolipoprotein E. We're running more simulations of Apolipoprotein E3Christchurch, a rare isoform of ApoE which is protective from familial Alzheimer's disease. We hope these studies will help understand why this isoform is protective and how we might be able to combat Alzh...
by jjmiller
Wed Nov 29, 2023 3:33 pm
Forum: Announcements - Folding Consortium
Topic: [GPU] project 18215 in full FAH!
Replies: 0
Views: 33457

[GPU] project 18215 in full FAH!

[GPU] p18215 – Studies on Apolipoprotein E - https://stats.foldingathome.org/project?p=18215

Code: Select all

<project type="OPENMM_23" id="18215">
<stats-credit v="67168"/>
<deadline v="5"/>
by jjmiller
Tue Jan 31, 2023 4:10 pm
Forum: Issues with a specific server
Topic: 206.223.170.146 (fah1) down
Replies: 11
Views: 13850

206.223.170.146 (fah1) down

This morning we lost cooling services for 206.223.170.146 (fah1) and had to urgently shut it down to prevent overheating. We'll have it back up again as soon as possible.
by jjmiller
Mon Dec 19, 2022 10:05 pm
Forum: Issues with a specific server
Topic: SOLVED : 206.223.170.146:8080 is really slow
Replies: 4
Views: 8202

Re: 206.223.170.146:8080 is really slow

Thanks all for the reports! I just took a peek at the server and am not seeing anything strange happening on our end. I issued a restart to the server with the hopes that resolves things and will keep an eye on this thread over the next few days.
by jjmiller
Wed Jun 01, 2022 12:48 pm
Forum: Issues with a specific WU
Topic: Project: 18201 (Run 24975, Clone 0, Gen 21)
Replies: 16
Views: 37363

Re: Project: 18201 (Run 24975, Clone 0, Gen 21)

Awesome, glad to hear there aren't any stuck and fingers crossed it stays that way! I did disable the other project housed on that server, so in the event we were seeing some weird intermittent overtaxed server issue (I'm not thinking so), hopefully that also helps.

Thanks,
by jjmiller
Tue May 31, 2022 10:41 pm
Forum: Issues with a specific WU
Topic: uploading problem project 18201
Replies: 2
Views: 6240

Re: uploading problem project 18201

Hi Runaway-

Apologies I'd missed this earlier and apologies that 18201 is throwing snags your way. Hopefully you aren't still having troubles with 18201.

Thanks,