new public beta client for linux, now 6.24

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new public beta client for linux, now 6.24

Postby kasson » Wed Jan 21, 2009 2:33 am

We have a new public beta client for linux, version 6.24.
The fah6 executable is available at http://www.stanford.edu/~kasson/folding/linux/fah6
This client has no expiration date. We will update the public download pages shortly.
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Re: new public beta client for linux, now 6.24

Postby smoking2000 » Wed Jan 21, 2009 3:14 am

Will the version on the public download page also be a 64bit binary, and thereby only for SMP clients?

Code: Select all
$ file fah6
fah6: ELF 64-bit LSB executable, x86-64, version 1 (SYSV), statically linked, for GNU/Linux 2.6.4, stripped
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Re: new public beta client for linux, now 6.24

Postby parkut » Wed Jan 21, 2009 3:54 am

Um, Client Version 6.24-plusalpha <<--- alpha???
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Re: new public beta client for linux, now 6.24

Postby P5-133XL » Wed Jan 21, 2009 4:32 am

So far so good -- Dropped it in on two client and they restarted their WU's without a hitch.

The obvious question: What does 6.24 do, that the other one didn't do or its corollary What doen't this do that 6.23 did?

No expiration date -- Does that mean non-beta version?
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Re: new public beta client for linux, now 6.24

Postby kasson » Wed Jan 21, 2009 6:09 am

The only major change is a fix for the unitinfo.txt bug so that the max progress reportable is 200% in unitinfo.txt. (We've also tried to fix this core-side, but the client contains an additional safeguard.) Everything that's in 6.23 should be in here.

Right now we're having a couple issues with the 32-bit linux build systems, so the 6.24 client is 64-bit for the time being. We ultimately anticipate having a 32-bit client as well, but I wouldn't expect it tomorrow...

The naming is misleading; our apologies. This is a full public beta.
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Re: new public beta client for linux, now 6.24

Postby kasson » Wed Jan 21, 2009 4:10 pm

Actually, my apologies. The first posted linux client was a 6.24+ alpha that you don't want to be running. I have now posted the 6.24 beta to replace it.
Sorry for the confusion. I updated and rebuilt, but one of the files in the build setup was cached and didn't get recompiled. Thanks to toTOW for catching this.
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Re: new public beta client for linux, now 6.24

Postby parkut » Wed Jan 21, 2009 4:35 pm

Ok, thanks. Now running Client Version 6.24beta
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Re: new public beta client for linux, now 6.24

Postby parkut » Wed Jan 21, 2009 6:47 pm

Still reporting goofy % completion in the unitinfo.txt file

Code: Select all
Current Work Unit
-----------------
Name: Gromacs
Tag: P2671R24C16G68
Download time: January 21 15:26:17
Due time: January 24 15:26:17
Progress: 1718015%  [||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||]

Current Work Unit
-----------------
Name: Gromacs
Tag: P2671R21C8G68
Download time: January 21 14:17:43
Due time: January 24 14:17:43
Progress: 1718026%  [||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||]

Current Work Unit
-----------------
Name: Gromacs
Tag: P2671R14C21G68
Download time: January 21 16:37:22
Due time: January 24 16:37:22
Progress: 1718004%  [||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||]

Current Work Unit
-----------------
Name: Gromacs
Tag: P2671R23C13G68
Download time: January 21 14:54:56
Due time: January 24 14:54:56
Progress: 1718020%  [||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||]

Current Work Unit
-----------------
Name: Gromacs
Tag: P2671R3C29G68
Download time: January 21 09:24:12
Due time: January 24 09:24:12
Progress: 1718074%  [||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||]

Current Work Unit
-----------------
Name: Gromacs
Tag: P2671R18C25G68
Download time: January 21 13:45:50
Due time: January 24 13:45:50
Progress: 1718032%  [||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||]
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Re: new public beta client for linux, now 6.24

Postby uncle_fungus » Wed Jan 21, 2009 8:04 pm

That is actually intentional there. The client has been capped at 200% so we can still see when the core throws a fit and gives stupidly large % values.
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Re: new public beta client for linux, now 6.24

Postby Ivoshiee » Thu Jan 22, 2009 10:41 pm

kasson wrote:We have a new public beta client for linux, version 6.24.
The fah6 executable is available at http://www.stanford.edu/~kasson/folding/linux/fah6
This client has no expiration date. We will update the public download pages shortly.

Code: Select all
[ivo@haskaa foldingathome]$ /etc/init.d/folding start

['folding' ver. 6.1]

Starting up FAH client(s) on 4 processor(s):
Starting FAH client at CPU1...
FAH client #1 startup: OK

*** glibc detected *** /home/ivo/folding2/foldingathome/CPU1/fah6: double free or corruption (out): 0x0000000040ef5e10 ***
======= Backtrace: =========
[0x45c191]
[0x45d6ea]
[0x408a21]
[0x401ed4]
[0x436e63]
[0x46a999]
======= Memory map: ========
00400000-004d8000 r-xp 00000000 08:03 5398591                            /home/ivo/folding2/foldingathome/fah6
005d7000-005db000 rw-p 000d7000 08:03 5398591                            /home/ivo/folding2/foldingathome/fah6
005db000-005e3000 rw-p 005db000 00:00 0
01e08000-01e2a000 rw-p 01e08000 00:00 0                                  [heap]
404f7000-404f8000 ---p 404f7000 00:00 0
404f8000-40ef8000 rw-p 404f8000 00:00 0
40ef8000-40ef9000 ---p 40ef8000 00:00 0
40ef9000-418f9000 rw-p 40ef9000 00:00 0
7f67d3300000-7f67d3324000 rw-p 7f67d3300000 00:00 0
7f67d3324000-7f67d3400000 ---p 7f67d3324000 00:00 0
7f67d34ba000-7f67d34bc000 rw-p 7f67d34ba000 00:00 0
7fffdb4a7000-7fffdb4bc000 rw-p 7ffffffea000 00:00 0                      [stack]
7fffdb5ff000-7fffdb600000 r-xp 7fffdb5ff000 00:00 0                      [vdso]
ffffffffff600000-ffffffffff601000 r-xp 00000000 00:00 0                  [vsyscall]

Starting of FAH client(s): FAILURE
[ivo@haskaa foldingathome]$

Code: Select all
[ivo@haskaa foldingathome]$ cat /etc/redhat-release
Fedora release 10 (Cambridge)
[ivo@haskaa foldingathome]$ uname -a
Linux haskaa 2.6.29-0.9.rc0.git4.fc11.x86_64 #1 SMP Fri Jan 2 01:32:05 EST 2009 x86_64 x86_64 x86_64 GNU/Linux
[ivo@haskaa foldingathome]$ rpm -q glibc
glibc-2.9-3.x86_64
glibc-2.9-3.i686
[ivo@haskaa foldingathome]$


Edit:

New FAH client can still be run, but it does take multiple attempts to get it going:
Code: Select all
[ivo@haskaa CPU1]$ ./fah6 -smp -verbosity 9

Note: Please read the license agreement (fah6 -license). Further
use of this software requires that you have read and accepted this agreement.

4 cores detected


--- Opening Log file [January 23 10:37:31 UTC]


# Linux SMP Console Edition ###################################################
###############################################################################

                       Folding@Home Client Version 6.24beta

                          http://folding.stanford.edu

###############################################################################
###############################################################################

Launch directory: /home/ivo/folding2/foldingathome/CPU1
Executable: ./fah6
Arguments: -smp -verbosity 9

[10:37:31] - Ask before connecting: No
[10:37:31] - User name: ivo@vendomar.ee (Team 0)
[10:37:31] - User ID: 7C4CB982D213B3E
[10:37:31] - Machine ID: 1
[10:37:31]
[10:37:31] Loaded queue successfully.
[10:37:31]
[10:37:31] - Autosending finished units... [January 23 10:37:31 UTC]
[10:37:31] + Processing work unit
[10:37:31] Trying to send all finished work units
[10:37:31] At least 4 processors must be requested.[10:37:31] + No unsent completed units remaining.
Core required: FahCore_a2.exe
[10:37:31] - Autosend completed
*** glibc detected *** ./fah6: double free or corruption (out): 0x0000000041dfde10 ***
======= Backtrace: =========
[0x45c191]
[0x45d6ea]
[0x408a21]
[0x401ed4]
[0x436e63]
[0x46a999]
======= Memory map: ========
00400000-004d8000 r-xp 00000000 08:03 5398591                            /home/ivo/folding2/foldingathome/fah6
005d7000-005db000 rw-p 000d7000 08:03 5398591                            /home/ivo/folding2/foldingathome/fah6
005db000-005e3000 rw-p 005db000 00:00 0
024ac000-024ce000 rw-p 024ac000 00:00 0                                  [heap]
4096f000-40970000 ---p 4096f000 00:00 0
40970000-41370000 rw-p 40970000 00:00 0
413ff000-41400000 ---p 413ff000 00:00 0
41400000-41e00000 rw-p 41400000 00:00 0
7f68e4000000-7f68e4024000 rw-p 7f68e4000000 00:00 0
7f68e4024000-7f68e4100000 ---p 7f68e4024000 00:00 0
7f68e4152000-7f68e4154000 rw-p 7f68e4152000 00:00 0
7fffec13e000-7fffec153000 rw-p 7ffffffea000 00:00 0                      [stack]
7fffec1ff000-7fffec200000 r-xp 7fffec1ff000 00:00 0                      [vdso]
ffffffffff600000-ffffffffff601000 r-xp 00000000 00:00 0                  [vsyscall]
Aborted
[ivo@haskaa CPU1]$
[ivo@haskaa CPU1]$ ./fah6 -smp -verbosity 9

Note: Please read the license agreement (fah6 -license). Further
use of this software requires that you have read and accepted this agreement.

4 cores detected


--- Opening Log file [January 23 10:37:33 UTC]


# Linux SMP Console Edition ###################################################
###############################################################################

                       Folding@Home Client Version 6.24beta

                          http://folding.stanford.edu

###############################################################################
###############################################################################

Launch directory: /home/ivo/folding2/foldingathome/CPU1
Executable: ./fah6
Arguments: -smp -verbosity 9

[10:37:33] - Ask before connecting: No
[10:37:33] - User name: ivo@vendomar.ee (Team 0)
[10:37:33] - User ID: 7C4CB982D213B3E
[10:37:33] - Machine ID: 1
[10:37:33]
[10:37:33] Loaded queue successfully.
[10:37:33]
[10:37:33] - Autosending finished units... [January 23 10:37:33 UTC]
[10:37:33] + Processing work unit
[10:37:33] Trying to send all finished work units
[10:37:33] At least 4 processors must be requested.[10:37:33] + No unsent completed units remaining.
Core required: FahCore_a2.exe
[10:37:33] - Autosend completed
*** glibc detected *** ./fah6: double free or corruption (out): 0x0000000040df2e10 ***
======= Backtrace: =========
[0x45c191]
[0x45d6ea]
[0x408a21]
[0x401ed4]
[0x436e63]
[0x46a999]
======= Memory map: ========
00400000-004d8000 r-xp 00000000 08:03 5398591                            /home/ivo/folding2/foldingathome/fah6
005d7000-005db000 rw-p 000d7000 08:03 5398591                            /home/ivo/folding2/foldingathome/fah6
005db000-005e3000 rw-p 005db000 00:00 0
0229c000-022be000 rw-p 0229c000 00:00 0                                  [heap]
403f4000-403f5000 ---p 403f4000 00:00 0
403f5000-40df5000 rw-p 403f5000 00:00 0
40df5000-40df6000 ---p 40df5000 00:00 0
40df6000-417f6000 rw-p 40df6000 00:00 0
7f233f800000-7f233f824000 rw-p 7f233f800000 00:00 0
7f233f824000-7f233f900000 ---p 7f233f824000 00:00 0
7f233f95d000-7f233f95f000 rw-p 7f233f95d000 00:00 0
7fff4794a000-7fff4795f000 rw-p 7ffffffea000 00:00 0                      [stack]
7fff479ff000-7fff47a00000 r-xp 7fff479ff000 00:00 0                      [vdso]
ffffffffff600000-ffffffffff601000 r-xp 00000000 00:00 0                  [vsyscall]
Aborted
[ivo@haskaa CPU1]$ ./fah6 -smp -verbosity 9

Note: Please read the license agreement (fah6 -license). Further
use of this software requires that you have read and accepted this agreement.

4 cores detected


--- Opening Log file [January 23 10:37:33 UTC]


# Linux SMP Console Edition ###################################################
###############################################################################

                       Folding@Home Client Version 6.24beta

                          http://folding.stanford.edu

###############################################################################
###############################################################################

Launch directory: /home/ivo/folding2/foldingathome/CPU1
Executable: ./fah6
Arguments: -smp -verbosity 9

[10:37:33] - Ask before connecting: No
[10:37:33] - User name: ivo@vendomar.ee (Team 0)
[10:37:33] - User ID: 7C4CB982D213B3E
[10:37:33] - Machine ID: 1
[10:37:33]
[10:37:33] Loaded queue successfully.
[10:37:33]
[10:37:33] + Processing work unit
[10:37:33] At least 4 processors must be requested.Core required: FahCore_a2.exe
[10:37:33] Core found.
[10:37:33] - Autosending finished units... [January 23 10:37:33 UTC]
[10:37:33] Trying to send all finished work units
[10:37:33] + No unsent completed units remaining.
[10:37:33] - Autosend completed
[10:37:33] Working on queue slot 08 [January 23 10:37:33 UTC]
[10:37:33] + Working ...
[10:37:33] - Calling './mpiexec -np 4 -host 127.0.0.1 ./FahCore_a2.exe -dir work/ -suffix 08 -checkpoint 15 -verbose -lifeline 3972 -version 624'

[10:37:34]
[10:37:34] *------------------------------*
[10:37:34] Folding@Home Gromacs SMP Core
[10:37:34] Version 2.04 (Wed Jan 21 09:23:43 PST 2009)
[10:37:34]
[10:37:34] Preparing to commence simulation
[10:37:34] - Ensuring status. Please wait.
[10:37:43] - Looking at optimizations...
[10:37:43] - Working with standard loops on this execution.
[10:37:43] - Files status OK
[10:37:44] - Expanded 4822142 -> 24058077 (decompressed 498.9 percent)
[10:37:44] Called DecompressByteArray: compressed_data_size=4822142 data_size=24058077, decompressed_data_size=24058077 diff=0
[10:37:44] - Digital signature verified
[10:37:44]
[10:37:44] Project: 2671 (Run 38, Clone 0, Gen 69)
[10:37:44]
[10:37:45] Entering M.D.
[10:37:51] Will resume from checkpoint file
NNODES=4, MYRANK=0, HOSTNAME=haskaa
NNODES=4, MYRANK=1, HOSTNAME=haskaa
NNODES=4, MYRANK=2, HOSTNAME=haskaa
NNODES=4, MYRANK=3, HOSTNAME=haskaa
NODEID=2 argc=20
NODEID=3 argc=20
NODEID=0 argc=20
NODEID=1 argc=20
                         :-)  G  R  O  M  A  C  S  (-:

                   Groningen Machine for Chemical Simulation

                          :-)  VERSION 4.0.3_pre  (-:


      Written by David van der Spoel, Erik Lindahl, Berk Hess, and others.
       Copyright (c) 1991-2000, University of Groningen, The Netherlands.
             Copyright (c) 2001-2008, The GROMACS development team,
            check out http://www.gromacs.org for more information.


                                :-)  mdrun  (-:

Reading file work/wudata_08.tpr, VERSION 3.3.99_development_20070618 (single precision)
Note: tpx file_version 48, software version 58

NOTE: The tpr file used for this simulation is in an old format, for less memory usage and possibly more performance create a new tpr file with an up to date version of grompp

Making 1D domain decomposition 1 x 1 x 4
starting mdrun '22908 system in water'
17500002 steps,  35000.0 ps (continuing from step 17250002,  34500.0 ps).
[10:37:53] Resuming from checkpoint
[10:37:53] Verified work/wudata_08.log
[10:37:53] Verified work/wudata_08.trr
[10:37:53] Verified work/wudata_08.xtc
[10:37:53] Verified work/wudata_08.edr




Is that the same bug manifestation as here?:
http://foldingforum.org/viewtopic.php?f=22&t=7148&p=80002#p80002
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Re: new public beta client for linux, now 6.24

Postby alpha754293 » Mon Jan 26, 2009 4:48 am

been running it for about 12 hours now. So far so good.
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Re: new public beta client for linux, now 6.24

Postby torswin » Sat Jan 31, 2009 3:00 pm

Got the same problem as Ivoshiee

Code: Select all
[torswin@Huginn foldingathome]$ ./folding start                                               

['folding' ver. 6.1]

Starting up FAH client(s) on 4 processor(s):
Starting FAH client at CPU1...
FAH client #1 startup: OK

*** glibc detected *** /home/torswin/foldingathome/CPU1/fah6: double free or corruption (out): 0x0000000041d88e10 ***
======= Backtrace: =========
[0x45c191]
[0x45d6ea]
[0x408a21]
[0x401ed4]
[0x436e63]
[0x46a999]
======= Memory map: ========
00400000-004d8000 r-xp 00000000 08:16 12640357                           /home/torswin/foldingathome/fah6
005d7000-005db000 rw-p 000d7000 08:16 12640357                           /home/torswin/foldingathome/fah6
005db000-005e3000 rw-p 005db000 00:00 0
0235f000-02381000 rw-p 0235f000 00:00 0                                  [heap]
4138a000-4138b000 ---p 4138a000 00:00 0
4138b000-41d8b000 rw-p 4138b000 00:00 0
41d8b000-41d8c000 ---p 41d8b000 00:00 0
41d8c000-4278c000 rw-p 41d8c000 00:00 0
7f827c300000-7f827c324000 rw-p 7f827c300000 00:00 0
7f827c324000-7f827c400000 ---p 7f827c324000 00:00 0
7f827c449000-7f827c44b000 rw-p 7f827c449000 00:00 0
7fff84435000-7fff8444a000 rw-p 7ffffffea000 00:00 0                      [stack]
7fff845fe000-7fff845ff000 r-xp 7fff845fe000 00:00 0                      [vdso]
ffffffffff600000-ffffffffff601000 r-xp 00000000 00:00 0                  [vsyscall]

Starting of FAH client(s): FAILURE
[torswin@Huginn foldingathome]$
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Re: new public beta client for linux, now 6.24

Postby pcowley » Tue Feb 03, 2009 6:42 pm

Just recently download this version as the other previous version just stopped. No reason - just died. (it pissed me off that it did not say it had expired - that is just plain bad programming!)

Anyway, 6.24 did one unit (A1) and then when it finished and tried to get another unit get this:
Code: Select all
[18:31:15] Loaded queue successfully.
[18:31:15] - Autosending finished units... [February 3 18:31:15 UTC]
[18:31:15] Trying to send all finished work units
[18:31:15] + No unsent completed units remaining.
[18:31:15] - Autosend completed
[18:31:15] - Preparing to get new work unit...
[18:31:15] + Attempting to get work packet
[18:31:15] - Will indicate memory of 2000 MB
[18:31:15] - Connecting to assignment server
[18:31:15] Connecting to http://assign.stanford.edu:8080/
./FaH: line 1:  6742 Segmentation fault      ./fah6 -smp -verbosity 9


Any ideas?? I deleted everything in the work directory (which seems to accumulate cruft!) and queue.dat

Cheers
Pete
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Re: new public beta client for linux, now 6.24

Postby kasson » Tue Feb 03, 2009 7:30 pm

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Re: new public beta client for linux, now 6.24

Postby SavantStrike » Tue Feb 03, 2009 8:10 pm

Switched both of my boxes over to this two days ago and waited to make sure it worked. It's working, and it fixed the 100 percent completion problems I started having last week. Nice work!
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