Moderators: Site Moderators, PandeGroup
*********************** Log Started 2014-03-07T23:27:10Z ***********************
23:27:10:************************* Folding@home Client *************************
23:27:10: Website: http://folding.stanford.edu/
23:27:10: Copyright: (c) 2009-2014 Stanford University
23:27:10: Author: Joseph Coffland <joseph@cauldrondevelopment.com>
23:27:10: Args: --open-web-control
23:27:10: Config: C:/Users/Anonymous/AppData/Roaming/FAHClient/config.xml
23:27:10:******************************** Build ********************************
23:27:10: Version: 7.4.4
23:27:10: Date: Mar 4 2014
23:27:10: Time: 20:26:54
23:27:10: SVN Rev: 4130
23:27:10: Branch: fah/trunk/client
23:27:10: Compiler: Intel(R) C++ MSVC 1500 mode 1200
23:27:10: Options: /TP /nologo /EHa /Qdiag-disable:4297,4103,1786,279 /Ox -arch:SSE
23:27:10: /QaxSSE2,SSE3,SSSE3,SSE4.1,SSE4.2 /Qopenmp /Qrestrict /MT /Qmkl
23:27:10: Platform: win32 XP
23:27:10: Bits: 32
23:27:10: Mode: Release
23:27:10:******************************* System ********************************
23:27:10: CPU: Intel(R) Core(TM) i7 CPU 860 @ 2.80GHz
23:27:10: CPU ID: GenuineIntel Family 6 Model 30 Stepping 5
23:27:10: CPUs: 8
23:27:10: Memory: 4.00GiB
23:27:10: Free Memory: 2.84GiB
23:27:10: Threads: WINDOWS_THREADS
23:27:10: OS Version: 6.1
23:27:10: Has Battery: false
23:27:10: On Battery: false
23:27:10: UTC Offset: 4
23:27:10: PID: 980
23:27:10: CWD: C:/Users/Anonymous/AppData/Roaming/FAHClient
23:27:10: OS: Windows 7 Ultimate
23:27:10: OS Arch: AMD64
23:27:10: GPUs: 0
23:27:10: CUDA: Not detected
23:27:10:Win32 Service: false
23:27:10:***********************************************************************
23:27:10:<config>
23:27:10: <!-- Folding Slots -->
23:27:10: <slot id='0' type='CPU'/>
23:27:10:</config>
23:27:10:Trying to access database...
23:27:10:Successfully acquired database lock
23:27:10:Enabled folding slot 00: READY cpu:7
23:27:10:WU00:FS00:Starting
23:27:10:WU00:FS00:Running FahCore: "C:\Program Files (x86)\FAHClient/FAHCoreWrapper.exe" C:/Users/Anonymous/AppData/Roaming/FAHClient/cores/www.stanford.edu/~pande/Win32/AMD64/Core_a4.fah/FahCore_a4.exe -dir 00 -suffix 01 -version 704 -lifeline 980 -checkpoint 15 -np 7
23:27:10:WU00:FS00:Started FahCore on PID 4032
23:27:10:WU00:FS00:Core PID:1000
23:27:10:WU00:FS00:FahCore 0xa4 started
23:27:11:WU00:FS00:0xa4:
23:27:11:WU00:FS00:0xa4:*------------------------------*
23:27:11:WU00:FS00:0xa4:Folding@Home Gromacs GB Core
23:27:11:WU00:FS00:0xa4:Version 2.27 (Dec. 15, 2010)
23:27:11:WU00:FS00:0xa4:
23:27:11:WU00:FS00:0xa4:Preparing to commence simulation
23:27:11:WU00:FS00:0xa4:- Looking at optimizations...
23:27:11:WU00:FS00:0xa4:- Files status OK
23:27:11:WU00:FS00:0xa4:- Expanded 546568 -> 843608 (decompressed 154.3 percent)
23:27:11:WU00:FS00:0xa4:Called DecompressByteArray: compressed_data_size=546568 data_size=843608, decompressed_data_size=843608 diff=0
23:27:11:WU00:FS00:0xa4:- Digital signature verified
23:27:11:WU00:FS00:0xa4:
23:27:11:WU00:FS00:0xa4:Project: 7646 (Run 6, Clone 3, Gen 134)
23:27:11:WU00:FS00:0xa4:
23:27:11:WU00:FS00:0xa4:Assembly optimizations on if available.
23:27:11:WU00:FS00:0xa4:Entering M.D.
23:27:14:12:127.0.0.1:New Web connection
23:27:16:WU00:FS00:0xa4:Mapping NT from 7 to 7
23:27:17:WU00:FS00:0xa4:Completed 0 out of 2500000 steps (0%)
23:47:12:WU00:FS00:0xa4:Completed 25000 out of 2500000 steps (1%)
*********************** Log Started 2014-03-07T22:52:37Z ***********************
22:52:37:************************* Folding@home Client *************************
22:52:37: Website: http://folding.stanford.edu/
22:52:37: Copyright: (c) 2009-2014 Stanford University
22:52:37: Author: Joseph Coffland <joseph@cauldrondevelopment.com>
22:52:37: Args: --open-web-control
22:52:37: Config: C:/Users/Anonymous/AppData/Roaming/FAHClient/config.xml
22:52:37:******************************** Build ********************************
22:52:37: Version: 7.4.4
22:52:37: Date: Mar 4 2014
22:52:37: Time: 20:26:54
22:52:37: SVN Rev: 4130
22:52:37: Branch: fah/trunk/client
22:52:37: Compiler: Intel(R) C++ MSVC 1500 mode 1200
22:52:37: Options: /TP /nologo /EHa /Qdiag-disable:4297,4103,1786,279 /Ox -arch:SSE
22:52:37: /QaxSSE2,SSE3,SSSE3,SSE4.1,SSE4.2 /Qopenmp /Qrestrict /MT /Qmkl
22:52:37: Platform: win32 XP
22:52:37: Bits: 32
22:52:37: Mode: Release
22:52:37:******************************* System ********************************
22:52:37: CPU: Intel(R) Core(TM) i7 CPU 860 @ 2.80GHz
22:52:37: CPU ID: GenuineIntel Family 6 Model 30 Stepping 5
22:52:37: CPUs: 8
22:52:37: Memory: 4.00GiB
22:52:37: Free Memory: 3.27GiB
22:52:37: Threads: WINDOWS_THREADS
22:52:37: OS Version: 6.2
22:52:37: Has Battery: false
22:52:37: On Battery: false
22:52:37: UTC Offset: 4
22:52:37: PID: 3148
22:52:37: CWD: C:/Users/Anonymous/AppData/Roaming/FAHClient
22:52:37: OS: Windows 8 Pro
22:52:37: OS Arch: AMD64
22:52:37: GPUs: 0
22:52:37: CUDA: Not detected
22:52:37:Win32 Service: false
22:52:37:***********************************************************************
22:52:37:<config>
22:52:37: <!-- Folding Slots -->
22:52:37: <slot id='0' type='CPU'/>
22:52:37:</config>
22:52:37:Trying to access database...
22:52:37:Successfully acquired database lock
22:52:37:Enabled folding slot 00: READY cpu:7
22:52:37:WU00:FS00:Starting
22:52:37:WU00:FS00:Running FahCore: "C:\Program Files (x86)\FAHClient/FAHCoreWrapper.exe" C:/Users/Anonymous/AppData/Roaming/FAHClient/cores/www.stanford.edu/~pande/Win32/AMD64/Core_a3.fah/FahCore_a3.exe -dir 00 -suffix 01 -version 704 -lifeline 3148 -checkpoint 15 -np 7
22:52:37:WU00:FS00:Started FahCore on PID 3436
22:52:37:WU00:FS00:Core PID:4000
22:52:37:WU00:FS00:FahCore 0xa3 started
22:52:38:WU00:FS00:0xa3:
22:52:38:WU00:FS00:0xa3:*------------------------------*
22:52:38:WU00:FS00:0xa3:Folding@Home Gromacs SMP Core
22:52:38:WU00:FS00:0xa3:Version 2.27 (Dec. 15, 2010)
22:52:38:WU00:FS00:0xa3:
22:52:38:WU00:FS00:0xa3:Preparing to commence simulation
22:52:38:WU00:FS00:0xa3:- Looking at optimizations...
22:52:38:WU00:FS00:0xa3:- Files status OK
22:52:38:WU00:FS00:0xa3:- Expanded 3850137 -> 4392432 (decompressed 114.0 percent)
22:52:38:WU00:FS00:0xa3:Called DecompressByteArray: compressed_data_size=3850137 data_size=4392432, decompressed_data_size=4392432 diff=0
22:52:38:WU00:FS00:0xa3:- Digital signature verified
22:52:38:WU00:FS00:0xa3:
22:52:38:WU00:FS00:0xa3:Project: 8581 (Run 0, Clone 5, Gen 444)
22:52:38:WU00:FS00:0xa3:
22:52:38:WU00:FS00:0xa3:Assembly optimizations on if available.
22:52:38:WU00:FS00:0xa3:Entering M.D.
22:52:40:11:127.0.0.1:New Web connection
22:52:44:WU00:FS00:0xa3:Mapping NT from 7 to 7
22:52:44:WU00:FS00:0xa3:Completed 0 out of 500000 steps (0%)
23:05:48:WU00:FS00:0xa3:Completed 5000 out of 500000 steps (1%)
23:17:47:WU00:FS00:0xa3:Completed 10000 out of 500000 steps (2%)
*********************** Log Started 2014-03-08T00:14:54Z ***********************
00:14:54:************************* Folding@home Client *************************
00:14:54: Website: http://folding.stanford.edu/
00:14:54: Copyright: (c) 2009-2014 Stanford University
00:14:54: Author: Joseph Coffland <joseph@cauldrondevelopment.com>
00:14:54: Args: --child --lifeline 1698 /etc/fahclient/config.xml --run-as
00:14:54: fahclient --pid-file=/var/run/fahclient.pid --daemon
00:14:54: Config: /etc/fahclient/config.xml
00:14:54:******************************** Build ********************************
00:14:54: Version: 7.4.4
00:14:54: Date: Mar 4 2014
00:14:54: Time: 12:02:38
00:14:54: SVN Rev: 4130
00:14:54: Branch: fah/trunk/client
00:14:54: Compiler: GNU 4.4.7
00:14:54: Options: -std=gnu++98 -O3 -funroll-loops -mfpmath=sse -ffast-math
00:14:54: -fno-unsafe-math-optimizations -msse2
00:14:54: Platform: linux2 3.2.0-1-amd64
00:14:54: Bits: 64
00:14:54: Mode: Release
00:14:54:******************************* System ********************************
00:14:54: CPU: Intel(R) Core(TM) i7 CPU 860 @ 2.80GHz
00:14:54: CPU ID: GenuineIntel Family 6 Model 30 Stepping 5
00:14:54: CPUs: 8
00:14:54: Memory: 3.85GiB
00:14:54:Free Memory: 3.44GiB
00:14:54: Threads: POSIX_THREADS
00:14:54: OS Version: 3.8
00:14:54:Has Battery: false
00:14:54: On Battery: false
00:14:54: UTC Offset: 0
00:14:54: PID: 1700
00:14:54: CWD: /var/lib/fahclient
00:14:54: OS: Linux 3.8.0-36-generic x86_64
00:14:54: OS Arch: AMD64
00:14:54: GPUs: 0
00:14:54: CUDA: Not detected
00:14:54:***********************************************************************
00:14:54:<config>
00:14:54: <!-- Client Control -->
00:14:54: <fold-anon v='true'/>
00:14:54:
00:14:54: <!-- Folding Slot Configuration -->
00:14:54: <gpu v='false'/>
00:14:54:
00:14:54: <!-- Folding Slots -->
00:14:54: <slot id='0' type='CPU'/>
00:14:54:</config>
00:14:54:Switching to user fahclient
00:14:54:Trying to access database...
00:14:55:Successfully acquired database lock
00:14:55:Enabled folding slot 00: READY cpu:7
00:14:55:WU00:FS00:Starting
00:14:55:WU00:FS00:Running FahCore: /usr/bin/FAHCoreWrapper /var/lib/fahclient/cores/www.stanford.edu/~pande/Linux/AMD64/Core_a3.fah/FahCore_a3 -dir 00 -suffix 01 -version 704 -lifeline 1700 -checkpoint 15 -np 7
00:14:55:WU00:FS00:Started FahCore on PID 1923
00:14:55:WU00:FS00:Core PID:2016
00:14:55:WU00:FS00:FahCore 0xa3 started
00:14:56:WU00:FS00:0xa3:
00:14:56:WU00:FS00:0xa3:*------------------------------*
00:14:56:WU00:FS00:0xa3:Folding@Home Gromacs SMP Core
00:14:56:WU00:FS00:0xa3:Version 2.27 (Dec. 15, 2010)
00:14:56:WU00:FS00:0xa3:
00:14:56:WU00:FS00:0xa3:Preparing to commence simulation
00:14:56:WU00:FS00:0xa3:- Looking at optimizations...
00:14:56:WU00:FS00:0xa3:- Files status OK
00:14:56:WU00:FS00:0xa3:- Expanded 3845612 -> 4375408 (decompressed 113.7 percent)
00:14:56:WU00:FS00:0xa3:Called DecompressByteArray: compressed_data_size=3845612 data_size=4375408, decompressed_data_size=4375408 diff=0
00:14:56:WU00:FS00:0xa3:- Digital signature verified
00:14:56:WU00:FS00:0xa3:
00:14:56:WU00:FS00:0xa3:Project: 8579 (Run 0, Clone 0, Gen 495)
00:14:56:WU00:FS00:0xa3:
00:14:56:WU00:FS00:0xa3:Assembly optimizations on if available.
00:14:56:WU00:FS00:0xa3:Entering M.D.
00:15:02:WU00:FS00:0xa3:Mapping NT from 7 to 7
00:15:06:WU00:FS00:0xa3:Completed 0 out of 500000 steps (0%)
00:26:18:WU00:FS00:0xa3:Completed 5000 out of 500000 steps (1%)
00:37:06:WU00:FS00:0xa3:Completed 10000 out of 500000 steps (2%)
00:47:53:WU00:FS00:0xa3:Completed 15000 out of 500000 steps (3%)
00:58:39:WU00:FS00:0xa3:Completed 20000 out of 500000 steps (4%)
01:09:28:WU00:FS00:0xa3:Completed 25000 out of 500000 steps (5%)
*********************** Log Started 2014-03-08T01:42:21Z ***********************
01:42:21:************************* Folding@home Client *************************
01:42:21: Website: http://folding.stanford.edu/
01:42:21: Copyright: (c) 2009-2014 Stanford University
01:42:21: Author: Joseph Coffland <joseph@cauldrondevelopment.com>
01:42:21: Args: --child --lifeline 65 --respawn
01:42:21: Config: /Library/Application Support/FAHClient/config.xml
01:42:21:******************************** Build ********************************
01:42:21: Version: 7.4.4
01:42:21: Date: Mar 4 2014
01:42:21: Time: 20:27:54
01:42:21: SVN Rev: 4130
01:42:21: Branch: fah/trunk/client
01:42:21: Compiler: GNU 4.2.1 (Apple Inc. build 5666) (dot 3)
01:42:21: Options: -std=gnu++98 -O3 -funroll-loops -mfpmath=sse -ffast-math
01:42:21: -fno-unsafe-math-optimizations -msse3 -arch x86_64
01:42:21: -mmacosx-version-min=10.6
01:42:21: Platform: darwin 10.8.0
01:42:21: Bits: 64
01:42:21: Mode: Release
01:42:21:******************************* System ********************************
01:42:21: CPU: Intel(R) Core(TM) i7 CPU 860 @ 2.80GHz
01:42:21: CPU ID: GenuineIntel Family 6 Model 30 Stepping 5
01:42:21: CPUs: 8
01:42:21: Memory: 4.00GiB
01:42:21:Free Memory: 3.39GiB
01:42:21: Threads: POSIX_THREADS
01:42:21: OS Version: 10.9
01:42:21:Has Battery: false
01:42:21: On Battery: false
01:42:21: UTC Offset: 0
01:42:21: PID: 173
01:42:21: CWD: /Library/Application Support/FAHClient
01:42:21: OS: Darwin 13.1.0 x86_64
01:42:21: OS Arch: AMD64
01:42:21: GPUs: 0
01:42:21: CUDA: Not detected
01:42:21:***********************************************************************
01:42:21:<config>
01:42:21: <!-- Folding Slots -->
01:42:21: <slot id='0' type='CPU'/>
01:42:21:</config>
01:42:21:Trying to access database...
01:42:29:Successfully acquired database lock
01:42:29:Enabled folding slot 00: READY cpu:7
01:42:29:WU00:FS00:Starting
01:42:29:WU00:FS00:Running FahCore: /usr/bin/FAHCoreWrapper "/Library/Application Support/FAHClient/cores/www.stanford.edu/~pande/OSX/AMD64/Core_a4.fah/FahCore_a4" -dir 00 -suffix 01 -version 704 -lifeline 173 -checkpoint 15 -np 7
01:42:29:WU00:FS00:Started FahCore on PID 224
01:42:32:WU00:FS00:Core PID:228
01:42:32:WU00:FS00:FahCore 0xa4 started
01:42:34:WU00:FS00:0xa4:
01:42:34:WU00:FS00:0xa4:*------------------------------*
01:42:34:WU00:FS00:0xa4:Folding@Home Gromacs Core
01:42:34:WU00:FS00:0xa4:Version 2.27 (Thu Feb 10 09:46:40 PST 2011)
01:42:34:WU00:FS00:0xa4:
01:42:34:WU00:FS00:0xa4:Preparing to commence simulation
01:42:34:WU00:FS00:0xa4:- Looking at optimizations...
01:42:34:WU00:FS00:0xa4:- Files status OK
01:42:34:WU00:FS00:0xa4:- Expanded 882159 -> 1469104 (decompressed 166.5 percent)
01:42:34:WU00:FS00:0xa4:Called DecompressByteArray: compressed_data_size=882159 data_size=1469104, decompressed_data_size=1469104 diff=0
01:42:34:WU00:FS00:0xa4:- Digital signature verified
01:42:34:WU00:FS00:0xa4:
01:42:34:WU00:FS00:0xa4:Project: 9005 (Run 139, Clone 3, Gen 37)
01:42:34:WU00:FS00:0xa4:
01:42:34:WU00:FS00:0xa4:Assembly optimizations on if available.
01:42:34:WU00:FS00:0xa4:Entering M.D.
01:42:40:WU00:FS00:0xa4:Mapping NT from 7 to 7
01:42:43:WU00:FS00:0xa4:Completed 0 out of 250000 steps (0%)
01:44:34:WU00:FS00:0xa4:Completed 2500 out of 250000 steps (1%)
01:46:18:WU00:FS00:0xa4:Completed 5000 out of 250000 steps (2%)
01:48:02:WU00:FS00:0xa4:Completed 7500 out of 250000 steps (3%)
01:49:47:WU00:FS00:0xa4:Completed 10000 out of 250000 steps (4%)
01:51:31:WU00:FS00:0xa4:Completed 12500 out of 250000 steps (5%)
01:53:17:WU00:FS00:0xa4:Completed 15000 out of 250000 steps (6%)
DEBUG: Config: power = medium main.js:73
DEBUG: NaCl module loading main.js:73
DEBUG: Status: downloading: Downloading the Folding@home software in your Web browser. On your first visit this can take awhile. main.js:73
DEBUG: load progress: 0.0% (0 of 18000000 bytes) main.js:73
DEBUG: load progress: 0.0% (0 of 18446744073709552000 bytes) main.js:73
SNIP
DEBUG: load progress: 0.0% (17086055 of 18446744073709552000 bytes) main.js:73
DEBUG: load progress: 0.0% (17106340 of 18446744073709552000 bytes) main.js:73
DEBUG: load progress: 0.0% (17125192 of 18446744073709552000 bytes) main.js:73
DEBUG: load progress: 100.0% (17125192 of 17125192 bytes) main.js:73
DEBUG: NaCl module loaded main.js:73
DEBUG: NaCl module responded main.js:73
DEBUG: Status: downloading: Requesting ID. main.js:73
DEBUG: Status: downloading: Requesting ID. main.js:73
DEBUG: Config: id = 0x1ec53118530cef60 main.js:73
DEBUG: Status: downloading: Requesting a work server assignment. main.js:73
DEBUG: Status: downloading: Requesting a work server assignment. main.js:73
DEBUG: WS: {"client_id":"0x1ec53118530cef60","threads":8,"version":"8.0.0","type":"NACL","os":"NACL","user":"Anonymous","team":0,"ts":"2014-02-25T19:30:41Z","ws":"143.89.28.86","project":2981} main.js:73
DEBUG: Status: downloading: Downloading a work unit. main.js:73
DEBUG: Status: downloading: Downloading a work unit. main.js:73
Resource interpreted as Image but transferred with MIME type text/plain: "data:;base64,
SNIP
DEBUG: WU: {"client_id":"0x1ec53118530cef60","threads":8,"version":"8.0.0","type":"NACL","os":"NACL","user":"Anonymous","team":0,"ts":"2014-02-25T19:30:41Z","ws":"143.89.28.86","project":2981,"server_version":703,"core":176,"core_version":227,"unit_id":"0x000000770893a18a52e6da85807cea17","run":0,"clone":28,"gen":86,"wu_ts":"2014-02-25T19:30:43Z","deadline":"2014-02-26T19:30:43Z","timeout":"2014-02-25T21:54:43Z","credit":10,"compression":"bzip2","checksum":"mwkD5fo9cjLAQsOKM9ip8EGg7mlAmsv5taCtcR9qMQI="} main.js:73
DEBUG: Status: running: Starting work unit. main.js:73
DEBUG: core: checksum verified main.js:73
DEBUG: core: unpacking: frame86.tpr main.js:73
DEBUG: :-) G R O M A C S (-: main.js:73
DEBUG: Groningen Machine for Chemical Simulation main.js:73
DEBUG: :-) VERSION 4.6.5 (-: main.js:73
DEBUG: Contributions from Mark Abraham, Emile Apol, Rossen Apostolov, Herman J.C. Berendsen, Aldert van Buuren, Pär Bjelkmar, Rudi van Drunen, Anton Feenstra, Gerrit Groenhof, Christoph Junghans, Peter Kasson, Carsten Kutzner, Per Larsson, Pieter Meulenhoff, Teemu Murtola, Szilard Pall, Sander Pronk, Roland Schulz, Michael Shirts, Alfons Sijbers, Peter Tieleman, main.js:73
DEBUG: Berk Hess, David van der Spoel, and Erik Lindahl. main.js:73
DEBUG: Copyright (c) 1991-2000, University of Groningen, The Netherlands. Copyright (c) 2001-2012,2013, The GROMACS development team at Uppsala University & The Royal Institute of Technology, Sweden. check out http://www.gromacs.org for more information. main.js:73
DEBUG: main.js:73
DEBUG: :-) Gromacs (-: main.js:73
DEBUG: Option------------------------------------------------------------ main.js:73
DEBUG: -s frame86.tpr Input Run input file: tpr tpb tpa -o traj.trr Output Full precision trajectory: trr trj cpt -x traj.xtc Output, Opt. Compressed trajectory (portable xdr format)-cpi state.cpt Input, Opt. Checkpoint file-cpo state.cpt Output, Opt. Checkpoint file -c confout.gro Output Structure file: gro g96 pdb etc. -e ener.edr Output Energy file -g md.log Output Log file-dhdl dhdl.xvg Output, Opt. xvgr/xmgr file-field field.xvg Output, Opt. xvgr/xmgr file-table table.xvg Input, Opt. xvgr/xmgr file-tabletf tabletf.xvg Input, Opt. xvgr/xmgr file-tablep tablep.xvg Input, Opt. xvgr/xmgr file-tableb table.xvg Input, Opt. xvgr/xmgr file-rerun rerun.xtc Input, Opt. Trajectory: xtc trr trj gro g96 pdb cpt-tpi tpi.xvg Output, Opt. xvgr/xmgr file-tpid tpidist.xvg Output, Opt. xvgr/xmgr file -ei sam.edi Input, Opt. ED sampling input -eo edsam.xvg Output, Opt. xvgr/xmgr file -j wham.gct Input, Opt. General coupling stuff -jo bam.gct Output, Opt. General coupling stuff-ffout gct.xvg Output, Opt. xvgr/xmgr file-devout deviatie.xvg Output, Opt. xvgr/xmgr file-runav runaver.xvg Output, Opt. xvgr/xmgr file -px pullx.xvg Output, Opt. xvgr/xmgr file -pf pullf.xvg Output, Opt. xvgr/xmgr file -ro rotation.xvg Output, Opt. xvgr/xmgr file -ra rotangles.log Output, Opt. Log file -rs rotslabs.log Output, Opt. Log file -rt rottorque.log Output, Opt. Log file-mtx nm.mtx Output, Opt. Hessian matrix -dn dipole.ndx Output, Opt. Index file-multidir rundir Input, Opt., Mult. Run directory-membed membed.dat Input, Opt. Generic data file -mp membed.top Input, Opt. Topology file -mn membed.ndx Input, Opt. Index file main.js:73
DEBUG: Option------------------------------------------------------ main.js:73
SNIP
Name Value Description
client-type advanced Assigns WUs in late-stage beta if available
client-type bigadv Assigns bigadv WUs on capable systems if available (CPU slot only)
next-unit-percentage X X should be between 90 and 100. It tells when the next WU should be
downloaded after the current WU reaches X percentage
Name Value Description
max-units X X can be any number; 0 is indefinite. It tells when to pause the slot
after X WUs are completed
checkpoint X X is a value between 3 and 30. It will create a checkpoint after X minutes
pause-on-start true FAHClient starts the slot in the pause state
pause-on-start false FAHClient will start the slot normally
max-packet-size small Configures the slot to get small WUs (~5MB)
max-packet-size normal Configures the slot to get normal WUs (~10MB)
max-packet-size big Configures the slot to get big WUs (~500MB)
Usage: FAHClient.exe [[--config] <filename>] [OPTIONS]...
Command line options:
--chdir <string>
Change directory before starting server. All files opened after this
point, such as the configuration file, must have paths relative to the new
directory.
--config <string=config.xml>
Set configuration file.
--configure
Create a basic configuration file, then exit.
--dump <string>
Dump either 'all' or a specific work unit, identified by its queue ID,
then exit.
--finish
Finish all current work units, send the results, then exit.
--help [string]
Print help screen or help on a particular option and exit.
--info
Print application and system information and exit.
--install-service
Install the application as a Win32 service then exit.
--license
License information and exit.
--lifeline <integer>
The application will watch for this process ID and exit if it goes away.
Usually the calling process' PID.
--lspci
List the PCI bus devices, which can be helpful for finding GPU vendor and
device IDs.
--print
Print configuration and exit.
--queue-info
Print work unit queue then exit.
--send
Send all finished work units, then exit.
--send-command <string>
Send a command to an already running client.
--send-finish [string]
Finish a slot or all slots on an already running client.
--send-pause [string]
Pause a slot or all slots on an already running client.
--send-unpause [string]
Unpause a slot or all slots on an already running client.
--start-service
Start Win32 service then exit.
--stop-service
Stop Win32 service then exit.
--uninstall-service
Uninstall the application as a Win32 service then exit.
-v
Increase verbosity level.
--version
Print application version and exit.
-v
Increase verbosity level.
Configuration options:
The following options can be specified in a configuration file or on the command
line using the following syntax:
--<option> <value>
or:
--<option>=<value>
or when marking boolean values true:
--<option> service-description <string=Folding@home Client>
The description for the Windows service control manager.
service-restart <boolean=true>
Configure Windows service to automatically restart on failure.
service-restart-delay <integer=5000>
The amount of time in milliseconds to delay between restarts of the Windows
service.
Client Control:
client-threads <integer=6>
The number of client processing threads.
cycle-rate <double=4>
The maximum cycle frequency in Hz of client threads.
cycles <integer=-1>
Run at most this many cycles. A value less than zero means run indefinitely.
data-directory <string=.>
The directory, relative to the current directory, where WU data and cores
are stored.
disable-sleep-when-active <boolean=true>
Attempt to keep the system from sleeping when folding, unless on battery.
exec-directory <string=C:\Program Files (x86)\FAHClient>
The directory, relative to the current executable, where executables and
dynamic libraries are located.
exit-when-done <boolean=false>
Exit when all slots are paused.
fold-anon <boolean=false>
Start folding even if not configured.
open-web-control <boolean=false>
Make an operating system specific call to open the Web Control in a browser
once client is fully loaded
Configuration:
config-rotate <boolean=true>
Rotate the configuration file to a backup when saving would overwrite the
previous configuration.
config-rotate-dir <string=configs>
Put rotated configs in this directory.
config-rotate-max <integer=16>
The maximum number of rotated configuration files to keep. A value of zero
will keep all configuration file backups.
Error Handling:
max-slot-errors <integer=10>
The maximum number of errors before a slot is paused.
max-unit-errors <integer=5>
The maximum number of errors before a work unit is dumped.
Folding Core:
checkpoint <integer=15>
Tell cores to checkpoint at least every # minutes.
core-dir <string=cores>
The directory to store core files in.
core-prep <string>
Run this command on cores after they are downloaded. This option is useful
for running Linux cores on BSD machines.
core-priority <string=idle>
Set the core priority. Valid values are: idle or low
cpu-affinity <boolean=false>
If true, try to lock core processes to a fixed CPU
cpu-usage <integer=100>
The maximum percentage of the CPU a core should use. Not implemented by all
cores.
gpu-usage <integer=100>
GPU usage as a percent from 10-100
no-assembly <boolean=false>
Tell cores to disable optimized assembly code.
Folding Slot Configuration:
cause <string=ANY>
The cause you prefer to support.
client-subtype <string=STDCLI>
The client subtype
client-type <string=normal>
The client type. Can be 'normal', 'advanced' or 'beta'.
cpu-species <string=X86_PENTIUM_II>
CPU species.
cpu-type <string=AMD64>
CPU type.
cpus <integer=-1>
How many CPUs a slot should use. <= 0 will use all the CPUs detected in the
system.
cuda-index <string>
The CUDA device index of the GPU, counting starts from 0.
extra-core-args <string>
Pass extra arguments to the core.
gpu <boolean=true>
Enable or disable auto-confiugration of GPU slots, requires appropriate
hardware.
gpu-index <string>
The index of the GPU as detected by the client. This index corresponds
directly to the GPUs listed in the client's '--info' output.
max-packet-size <string=normal>
Max size in bytes of a work unit packet. Can be small=5MB, normal=10MB,
big=500MB or a number.
memory <string>
Override memory, in bytes, reported to Folding@home.
opencl-index <string>
The OpenCL device index of the GPU, counting starts from 0.
os-species <string=UNKNOWN>
Operating system species.
os-type <string=WIN32>
Operating system type.
project-key <integer=0>
Key for access to restricted testing projects.
smp <boolean=true>
Enable or disable auto-configuration of SMP slots, requires appropriate
hardware.
GUI:
gui-enabled <boolean=true>
Set to false to disable the GUI. A GUI is not currently supported on all
operating systems.
HTTP Server:
allow <string=127.0.0.1>
Client addresses which are allowed to connect to this server. This option
overrides IPs which are denied in the deny option. The pattern 0/0 matches
all addresses.
connection-timeout <integer=60>
The maximum amount of time, in seconds, a connection can be idle before
being dropped.
deny <string=0/0>
Client address which are not allowed to connect to this server.
http-addresses <string=0:7396>
A space separated list of server address and port pairs to listen on in the
form <ip | hostname>[:<port>]
https-addresses <string=>
A space separated list of secure server address and port pairs to listen on
in the form <ip | hostname>[:<port>]
max-connect-time <integer=900>
The maximum amount of time, in seconds, a client can be connected to the
server.
max-connections <integer=800>
Sets the maximum number of simultaneous connections.
max-request-length <integer=52428800>
Sets the maximum length of a client request packet.
min-connect-time <integer=300>
The minimum amount of time, in seconds, a client must be connected to the
server before it can be dropped in favor or a new connection.
threads <integer=8>
Sets the number of server threads.
HTTP Server SSL:
certificate-file <string>
The servers certificate file in PEM format.
crl-file <string>
Supply a Certificate Revocation List. Overrides any internal CRL
private-key-file <string>
The servers private key file in PEM format.
Logging:
log <string=log.txt>
Set log file.
log-color <boolean=false>
Print log messages with ANSI color coding.
log-crlf <boolean=true>
Print carriage return and line feed at end of log lines.
log-date <boolean=false>
Print date information with log entries.
log-date-periodically <integer=21600>
Print date to log before new log entries if so many seconds have passed
since the last date was printed.
log-debug <boolean=true>
Disable or enable debugging info.
log-domain <boolean=false>
Print domain information with log entries.
log-domain-levels <string ...>
Set log levels by domain. Format is:
<domain>[:i|d|t]:<level> ...
Entries are separated by white-space and or commas.
i - info
d - debug
For example: server:i:3 module:6
Set 'server' domain info messages to level 3 and 'module' info and debug
messages to level 6. All other domains will follow the system wide log
verbosity level.
If <level> is negative it is relative to the system wide verbosity.
log-header <boolean=true>
Enable log message headers.
log-level <boolean=true>
Print level information with log entries.
log-no-info-header <boolean=true>
Don't print 'INFO(#):' in header.
log-redirect <boolean=false>
Redirect all output to log file. Implies !log-to-screen.
log-rotate <boolean=true>
Rotate log files on each run.
log-rotate-dir <string=logs>
Put rotated logs in this directory.
log-rotate-max <integer=16>
Maximum number of rotated logs to keep.
log-short-level <boolean=false>
Print shortened level information with log entries.
log-simple-domains <boolean=true>
Remove any leading directories and trailing file extensions from domains so
that source code file names can be easily used as log domains.
log-thread-id <boolean=false>
Print id with log entries.
log-thread-prefix <boolean=true>
Print thread prefixes, if set, with log entries.
log-time <boolean=true>
Print time information with log entries.
log-to-screen <boolean=true>
Log to screen.
log-truncate <boolean=false>
Truncate log file.
verbosity <integer=3>
Set logging level for INFO and DEBUG messages.
Network:
proxy <string=>
Set proxy for outgoing HTTP connections
proxy-enable <boolean=false>
Enable proxy configuration
proxy-pass <string=>
Set password for proxy connections
proxy-user <string=>
Set user name for proxy connections
Process Control:
child <boolean=false>
Disable 'daemon', 'fork', 'pid' and 'respawn' options. Also defaults
'log-to-screen' to false. Used internally.
daemon <boolean=false>
Short for --pid --service --respawn --log=''
pid <boolean=false>
Create PID file.
pid-file <string=Folding@home Client.pid>
Name of PID file.
priority <string>
Set the process priority. Valid values are: idle, low, normal, high or
realtime.
respawn <boolean=false>
Run the application as a child process and respawn if it is killed or exits.
service <boolean=false>
Ignore user logout or hangup and interrupt signals
Remote Command Server:
command-address <string=0.0.0.0>
The address to which the command server should be bound.
command-allow-no-pass <string=127.0.0.1>
IP address ranges that are allowed access to the command server with out a
password if the 'password' option is set. These addresses will also have to
be allowed IP based access.
command-deny-no-pass <string=0/0>
IP address ranges that are not allowed access to the command server with out
a password if the 'password' option is set. Overriden by
command-allow-no-pass
command-enable <boolean=true>
Set to false to disable the command server.
command-port <integer=36330>
The port to which the command server should be bound.
eval <string>
Evaluate the argument as a script.
password <string>
Set a command server password. Warning, setting a password disables the
default IP address blocking.
script <string>
Run commands from a script file.
Slot Control:
idle <boolean=false>
Only run slot when idle.
max-shutdown-wait <integer=60>
The maxumum amount of time to wait in seconds for a unit to exit on
shutdown.
pause-on-battery <boolean=true>
Pause the client or slot when the OS indicates the machine is running on
battery power.
pause-on-start <boolean=false>
If true the slot will be started in a paused state.
paused <boolean=false>
True of client is paused.
power <string=medium>
Set the client's power level. Valid values are 'light', 'medium' or 'full'.
This setting affects the defaults of several other options such as 'cpus',
'pause-on-battery', etc.
User Information:
machine-id <integer=0>
The machine ID.
passkey <string=>
Your passkey.
team <integer=0>
Your team number.
user <string=Anonymous>
Your user name.
Web Server:
web-allow <string=127.0.0.1>
Client addresses which are allowed to connect to this Web server. This
option overrides IPs which are denied in the web-deny option. This option
differs from the 'allow'/'deny' options in that clients that are not allowed
are served an access denied page rather than simply dropping the connection.
The value '0/0' matches all IPs.
web-deny <string=0/0>
Client address which are not allowed to connect to this Web server.
web-enable <boolean=true>
Set to false to disable the web server.
Web Server Sessions:
session-cookie <string=sid>
The name of the session cookie.
session-lifetime <integer=86400>
The maximum session lifetime in seconds. Zero for unlimited session
lifetime.
session-timeout <integer=3600>
The max maximum amount of time in seconds since the last time a session was
used before it timesout. Zero for no session timeout.
Work Unit Control:
dump-after-deadline <boolean=true>
Dump units if their deadline has passed.
max-queue <integer=16>
Maximum units per slot in the work queue.
max-units <integer=0>
Process at most this number of units, then pause.
next-unit-percentage <integer=99>
Pre-download the next work unit when the current one is this far along.
Values less than 90 are not allowed.
stall-detection-enabled <boolean=false>
Attempt to detect stalled work units and restart them.
stall-percent <integer=5>
Minimum estimated percent work unit completion since last frame before a WU
can be considered stalled, if zero the percentage is ignored.
stall-timeout <integer=1800>
Minimum time, in seconds, since last frame before a WU can be considered
stalled.
Usage: FAHViewer.exe [OPTIONS]...
Command line options:
--chdir <string>
Change directory before starting server. All files opened after this
point, such as the configuration file, must have paths relative to the new
directory.
--config <string=viewer.xml>
Set configuration file.
--help [string]
Print help screen or help on a particular option and exit.
--info
Print application and system information and exit.
--license
License information and exit.
--print
Print configuration and exit.
-v
Increase verbosity level.
--version
Print application version and exit.
-v
Increase verbosity level.
Configuration options:
The following options can be specified in a configuration file or on the command
line using the following syntax:
--<option> <value>
or:
--<option>=<value>
or when marking boolean values true:
--<option> background <string>
Specify an alternative background image to use. Must be in PPM format. The
value 'none' will disable the background image.
basic <boolean=false>
Disable advanced modes which require OpenGL 2.2
blur <boolean=true>
Enable blur (advanced only)
connect <string=127.0.0.1:36330>
An address and port to connect to in the form: <host | IP>:<port>
cycle-snapshots <boolean=true>
Cycle through snapshot frames.
force <boolean=false>
Force running on blacklisted GPUs or in advanced modes
fps <double=8>
Snapshot display speed in frames per second.
fullscreen <boolean=false>
Display in fullscreen mode
height <integer=600>
Screen height
interpolation-steps <integer=9>
The number of interpolated protein views to calculate between snapshots.
mode <integer=4>
Render mode
password <string=>
A password for accessing the remote client
profile <string=default>
Set performance profile. This effects the CPU usage vs. smooth rendering.
Valid options are: lean, default & mean
recompute-bonds <boolean=false>
Recompute bonds from expected bond lengths
show-buttons <boolean=true>
Display buttons
show-info <boolean=true>
Display simulation info
show-logos <boolean=true>
Display logos
slot <integer=0>
Slot on the client to view
test <boolean=true>
Load test data
tpr <string>
Load Gromacs .tpr file
trn <string>
Load Gromacs .trr or .trx file
width <integer=800>
Screen width
wiggle <boolean=true>
Enable atom wiggling which approximates simulation activity
x-rotation <double=0>
Rotation about the X-axis in degrees per second
xtc <string>
Load Gromacs .xtc file
xyz <string>
An XYZ file to read and display
y-rotation <double=10>
Rotation about the Y-axis in degrees per second
zoom <double=1.05>
Zoom level
Logging:
log <string>
Set log file.
log-color <boolean=false>
Print log messages with ANSI color coding.
log-crlf <boolean=true>
Print carriage return and line feed at end of log lines.
log-date <boolean=false>
Print date information with log entries.
log-date-periodically <integer=0>
Print date to log before new log entries if so many seconds have passed
since the last date was printed.
log-debug <boolean=true>
Disable or enable debugging info.
log-domain <boolean=false>
Print domain information with log entries.
log-domain-levels <string ...>
Set log levels by domain. Format is:
<domain>[:i|d|t]:<level> ...
Entries are separated by white-space and or commas.
i - info
d - debug
For example: server:i:3 module:6
Set 'server' domain info messages to level 3 and 'module' info and debug
messages to level 6. All other domains will follow the system wide log
verbosity level.
If <level> is negative it is relative to the system wide verbosity.
log-header <boolean=true>
Enable log message headers.
log-level <boolean=true>
Print level information with log entries.
log-no-info-header <boolean=false>
Don't print 'INFO(#):' in header.
log-redirect <boolean=false>
Redirect all output to log file. Implies !log-to-screen.
log-rotate <boolean=true>
Rotate log files on each run.
log-rotate-dir <string=logs>
Put rotated logs in this directory.
log-rotate-max <integer=0>
Maximum number of rotated logs to keep.
log-short-level <boolean=false>
Print shortened level information with log entries.
log-simple-domains <boolean=true>
Remove any leading directories and trailing file extensions from domains so
that source code file names can be easily used as log domains.
log-thread-id <boolean=false>
Print id with log entries.
log-thread-prefix <boolean=false>
Print thread prefixes, if set, with log entries.
log-time <boolean=true>
Print time information with log entries.
log-to-screen <boolean=true>
Log to screen.
log-truncate <boolean=false>
Truncate log file.
verbosity <integer=1>
Set logging level for INFO and DEBUG messages.
Viewer key commands:
a Show about screen.
1 Space Filling render mode.
2 Ball & Stick render mode.
3 Stick render mode.
4 Advanced Space Filling render mode. (Requires OpenGL 2.2)
5 Advanced Ball & Stick render mode. (Requires OpenGL 2.2)
6 Advanced Stick render mode. (Requires OpenGL 2.2)
7 Cartoon Space Filling render mode. (Requires OpenGL 2.2)
8 Cartoon Ball & Stick render mode. (Requires OpenGL 2.2)
b Toggle blur (advanced modes only).
i Toggle info display.
l Toggle logo display.
f Toggle fullscreen.
0 Toggle snapshot cycling.
+ Increase snapshot cycle rate.
- Decrease snapshot cycle rate.
[ Decrease slot ID.
] Increase slot ID.
<Space> Toggle rotation.
<Up> Increase X-axis rotation speed in the upward direction.
<Down> Increase X-axis rotation speed in the downward direction.
<Left> Increase Y-axis rotation speed in the left direction.
<Right> Increase Y-axis rotation speed in the right direction.
<Page Up> Zoom in.
<Page Down> Zoom out.
<ESC> Quit popup.
q Quit application or popup.
h Show help screen.
Viewer mouse commands:
Left Drag Rotate protein.
Wheel Zoom in and out.
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